Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015910163.1_cds_XP_016460243.1_53683
CDS Infomation

[gene=LOC107783738] [db_xref=GeneID:107783738] [protein=putative late blight resistance protein homolog R1B-16] [protein_id=XP_016460243.1] [location=join(2667..3706,3795..4848)] [gbkey=CDS]
Sequence

ATGGTTGGTTTTAATGAAGAGACTGAAATGCTTATAGAGCAACTTGTGAGAGGACATCGG
CAATTAGATGTGATCTCAATATTTGGAATGCCAGGACTAGGAAAAACAACATTGGCTAAG
AAATTGTATGATCATGAAGCAATTTCCAATCGCTTCGATATTCGCTTGTGGTGTTGTTCT
TCCCAATCTTATGATAATAGAGCTCTCTTGTTTGAATTATTGGGTCATATTTGCGAGCTT
GATGATATTACTAAAGAAAAAAATGATAATGAGTTAGCTGAGAAGCTTTATAGATATTTG
AAAGGAAAGAGGTATCTTATTGTAGTGGATGACGTTTGGAGTCCTAATGCATGGGATGAT
ATAAAGAGACCATTTCCAGATGATGATAAAGGAAGTAGGATTATTTTGACAACTAGACTT
GAATCAATCGCCACGTATGCAATGATCAATTCGAGTCCTCATCACCTTCGCTTGTTCACA
GAAGAAGAAAGTTGGATGCTAATGAAGGAGAAAGTATTCAAAGAAGATAATTATTATCCT
CAACAACTCGAGGATATAGGTAAGCAAATAGCGACTAAGTGTGGAGGATTACCTCTTGCA
ATTGTATTGGTAGCTGGTGTTCTTGCAAAAAATGATAAGGAAGTAGTTCATTGGCAACAA
GTAGGGGAACGTTTGAAGTCAAAAATGCAAGGTTGTATGGATATAGTTGAATCGAGTTAT
CAACACTTACCCCTTCATTTGCAAAATTGTTTTCTCTACTTTGCTTCATTTCTAGAGGGT
GAAAAAGTTCCTGTTCAAAAATTGATACGACTATGGATTGCAGAAAATTTTGTTGAAGCC
AGTAGTAGTACTAGATTGAAGAGCTTAGAGATGGTTGCAATGGATTATTTGATGGATTTA
ATTAGGAGCAACCTAGTGATGGTGGCTAATATAAATTCCTCAGGGGAGCTCAAAGCCGTC
TATATTCATGATGTAATACACGAATTTAGCTTGAGGAAAGCTAAAGTGGGCAACTTTTTG
CTGAGGATAAATGATCAGCTTGTTTATATACTTCCATCTTCCAAAGGTCGCTCTGGACGC
ATATATATCTTAGCACCTACTGGACGAAATATCAACACCTTACGATTCCTTCCCAGTGTA
AAATCTCCTTGGGTTGATTTAGACTTGGCTAAATCTTGGGAAAACCTGAGAGTATTAGAT
TTGAGTTCCGTAAAGCTGCATAAGACTCATGTAGATGCATTGAGATATCTGATTCATTTG
AAGTATTTGGAGCTGCAGTTGCCTTCTGATTACATTCCATATACAATATGCAACCTGAAG
GAGCTAGAGACATTTATAGCGACCGGAGTCTATCATAAATCCTGCATTCCAAATTCCATT
TGGGGTATGACAAGCTTAAGGCATTTGCATATAAGTACTCTATATACCTCTCAAATATTA
GAGGATCTTGACAACTTAAAAACATGTTCGAATCTGGTTATTGATGCTGGGGTGTATTAC
CAAAATCTTATGAAAAGATTACCCAATCTTGAAAAGCTCAGTTGTCGATTATGTGGTTCA
GGAACCCGTTTTTACAAATACTTTCCCGCTTTCGGGTCTCTTGGTCAACTCAAATCTCTC
AAGATTGATGTCACTAGGATATTGACATATCCCTATGGTTTTGAAGACTTTACATACCCG
TCAAGCCTCAAGAAATTAACTTTGGCATATCTTGAGCTCCCTTGGAGTAAAATGTCCTAC
ATTGGCCGTTTGTCCAACCTTGAATTTCTTAAATTAGAAGGAAGTGGTTTCAAAGGGAGA
CAGTGGGACGTTAAGGACGGGGAGTTTTCTAACCTTAAAGTTTTGAAATTAAAGAAACTA
GGACTCTTGGAATGGACAGCCTCTGATGACTCGTATCCCAACCTACAGAAAGTACTGGTG
CACGGGTGTTGGAAACTAGAGGAAATTCCTTATAGTTTTGGGAGTAGTTGCTCAATGCAA
CTTATTGAGGTAAGATCATGTTGTGACTCTGCGGTAAATGCTGCCCTCAAAATTAAAGAA
ACACAAATTGAGGAGATGGGGAATTCTGAATTCAAGGTTATTATTAGTAAGTAA

Peptide Sequence

PEP ID

XP_016460243.1
PEP Infomation

PREDICTED: putative late blight resistance protein homolog R1B-16 [Nicotiana tabacum]
Sequence

MVGFNEETEMLIEQLVRGHRQLDVISIFGMPGLGKTTLAKKLYDHEAISNRFDIRLWCCS
SQSYDNRALLFELLGHICELDDITKEKNDNELAEKLYRYLKGKRYLIVVDDVWSPNAWDD
IKRPFPDDDKGSRIILTTRLESIATYAMINSSPHHLRLFTEEESWMLMKEKVFKEDNYYP
QQLEDIGKQIATKCGGLPLAIVLVAGVLAKNDKEVVHWQQVGERLKSKMQGCMDIVESSY
QHLPLHLQNCFLYFASFLEGEKVPVQKLIRLWIAENFVEASSSTRLKSLEMVAMDYLMDL
IRSNLVMVANINSSGELKAVYIHDVIHEFSLRKAKVGNFLLRINDQLVYILPSSKGRSGR
IYILAPTGRNINTLRFLPSVKSPWVDLDLAKSWENLRVLDLSSVKLHKTHVDALRYLIHL
KYLELQLPSDYIPYTICNLKELETFIATGVYHKSCIPNSIWGMTSLRHLHISTLYTSQIL
EDLDNLKTCSNLVIDAGVYYQNLMKRLPNLEKLSCRLCGSGTRFYKYFPAFGSLGQLKSL
KIDVTRILTYPYGFEDFTYPSSLKKLTLAYLELPWSKMSYIGRLSNLEFLKLEGSGFKGR
QWDVKDGEFSNLKVLKLKKLGLLEWTASDDSYPNLQKVLVHGCWKLEEIPYSFGSSCSMQ
LIEVRSCCDSAVNAALKIKETQIEEMGNSEFKVIISK

Transcript Sequence

Gene sequence data has not been registered.